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1

Connecting Replication and Repair: YoaA, a Helicase-Related Protein, Promotes Azidothymidine Tolerance through Association with Chi, an Accessory Clamp Loader Protein

Brown, Laura T., Sutera, Vincent A., Zhou, Shen, Weitzel, Christopher S., Cheng, Yisha, Lovett, Susan T., Simmons, Lyle A.

Journal:

Year:

2015

Language:

english

File:

PDF, 3.04 MB

english, 2015

2

DnaA Protein of Escherichia coli: oligomerization at the E. coli chromosomal origin is required for initiation and involves specific N-terminal amino acids

Lyle A. Simmons, Magdalena Felczak, Jon M. Kaguni

Journal:

Molecular Microbiology

Year:

2003

Language:

english

File:

PDF, 126 KB

english, 2003

3

A Review of Digital, Social, and Mobile Technologies in Health Professional Education

Curran, Vernon, Matthews, Lauren, Fleet, Lisa, Simmons, Karla, Gustafson, Diana L., Wetsch, Lyle

Journal:

Journal of Continuing Education in the Health Professions

Year:

2017

Language:

english

File:

PDF, 1.20 MB

english, 2017

4

Sources of spontaneous mutagenesis in bacteria

Schroeder, Jeremy W., Yeesin, Ponlkrit, Simmons, Lyle A., Wang, Jue D.

Journal:

Critical Reviews in Biochemistry and Molecular Biology

Year:

2017

Language:

english

File:

PDF, 1.90 MB

english, 2017

5

Regulation of cell division in bacteria by monitoring genome integrity and DNA replication status

Burby, Peter E., Simmons, Lyle A.

Journal:

Journal of Bacteriology

Year:

2019

Language:

english

File:

PDF, 3.34 MB

english, 2019

6

Adoption and Use of Mobile Learning in Continuing Professional Development by Health and Human Services Professionals

Curran, Vernon, Fleet, Lisa, Simmons, Karla, Lannon, Heather, Gustafson, Diana L., Wang, Chenfang, Garmsiri, Mahyar, Wetsch, Lyle

Journal:

Journal of Continuing Education in the Health Professions

Year:

2019

File:

PDF, 512 KB

2019

7

The dnaAcos allele of Escherichia coli: hyperactive initiation is caused by substitution of A184V and Y271H, resulting in defective ATP binding and aberrant DNA replication control

Lyle A. Simmons, Jon M. Kaguni

Journal:

Molecular Microbiology

Year:

2003

Language:

english

File:

PDF, 308 KB

english, 2003

8

Hyperinitiation of DNA replication in Escherichia coli leads to replication fork collapse and inviability

Lyle A. Simmons, Adam M. Breier, Nicholas R. Cozzarelli, Jon M. Kaguni

Journal:

Molecular Microbiology

Year:

2004

Language:

english

File:

PDF, 238 KB

english, 2004

9

ROLES AND ACTIVITIES OF THE COMMONWEALTH GOVERNMENT UNIVERSITY DEPARTMENTS OF RURAL HEALTH

John S. Humphreys, David Lyle, John Wakerman, Elizabeth Chalmers, David Wilkinson, Judi Walker, David Simmons, Ann Larson

Journal:

Australian Journal of Rural Health

Year:

2000

Language:

english

File:

PDF, 182 KB

english, 2000

10

Negatively charged beads and transforming growth factor-β1 stimulate bone repair in rabbits

W. Glenn Lyle, David J. Simmons, Linda G. Phillips, Martin C. Robson

Journal:

Wound Repair and Regeneration

Year:

1996

Language:

english

File:

PDF, 827 KB

english, 1996

11

Multiple Ku orthologues mediate DNA non-homologous end-joining in the free-living form and during chronic infection of Sinorhizobium meliloti

Hajime Kobayashi, Lyle A. Simmons, Daniel S. Yuan, William J. Broughton, Graham C. Walker

Journal:

Molecular Microbiology

Year:

2008

Language:

english

File:

PDF, 456 KB

english, 2008

12

Sinorhizobium meliloti CpdR1 is critical for co-ordinating cell cycle progression and the symbiotic chronic infection

Hajime Kobayashi, Nicole J. De Nisco, Peter Chien, Lyle A. Simmons, Graham C. Walker

Journal:

Molecular Microbiology

Year:

2009

Language:

english

File:

PDF, 499 KB

english, 2009

13

Role of Escherichia coli YbeY, a highly conserved protein, in rRNA processing

Bryan W. Davies, Caroline Köhrer, Asha I. Jacob, Lyle A. Simmons, Jianyu Zhu, Lourdes M. Aleman, Uttam L. RajBhandary, Graham C. Walker

Journal:

Molecular Microbiology

Year:

2010

Language:

english

File:

PDF, 1.31 MB

english, 2010

14

Mismatch repair causes the dynamic release of an essential DNA polymerase from the replication fork

Andrew D. Klocko, Jeremy W. Schroeder, Brian W. Walsh, Justin S. Lenhart, Margery L. Evans, Lyle A. Simmons

Journal:

Molecular Microbiology

Year:

2011

Language:

english

File:

PDF, 1.05 MB

english, 2011

15

Y-family DNA polymerases respond to DNA damage-independent inhibition of replication fork progression

Godoy, Veronica G, Jarosz, Daniel F, Walker, Fabianne L, Simmons, Lyle A, Walker, Graham C

Journal:

The EMBO Journal

Year:

2006

Language:

english

File:

PDF, 423 KB

english, 2006

16

β Clamp Directs Localization of Mismatch Repair in Bacillus subtilis

Lyle A. Simmons, Bryan W. Davies, Alan D. Grossman, Graham C. Walker

Journal:

Year:

2008

Language:

english

File:

PDF, 1.15 MB

english, 2008

17

Hydroxyurea Induces Hydroxyl Radical-Mediated Cell Death in Escherichia coli

Bryan W. Davies, Michael A. Kohanski, Lyle A. Simmons, Jonathan A. Winkler, James J. Collins, Graham C. Walker

Journal:

Year:

2009

Language:

english

File:

PDF, 1008 KB

english, 2009

18

Structure of the Endonuclease Domain of MutL: Unlicensed to Cut

Monica C. Pillon, Jessica J. Lorenowicz, Michael Uckelmann, Andrew D. Klocko, Ryan R. Mitchell, Yu Seon Chung, Paul Modrich, Graham C. Walker, Lyle A. Simmons, Peter Friedhoff, Alba Guarné

Journal:

Year:

2010

Language:

english

File:

PDF, 910 KB

english, 2010

19

Cholinesterase inhibition and depression of the photic after discharge of flash evoked potentials following acute or repeated exposures to a mixture of carbaryl and propoxur

Jean-Claude Mwanza, Danielle F. Lyke, Richard C. Hertzberg, Lynne Haber, Melissa Kohrman-Vincent, Ruosha Li, Yi Pan, Robert H. Lyles, Jane Ellen Simmons, Denise K. MacMillan, R. Dan Zehr, Adam E. Swan

Journal:

NeuroToxicology

Year:

2012

Language:

english

File:

PDF, 785 KB

english, 2012

20

DnaN clamp zones provide a platform for spatiotemporal coupling of mismatch detection to DNA replication

Lenhart, Justin S., Sharma, Anushi, Hingorani, Manju M., Simmons, Lyle A.

Journal:

Molecular Microbiology

Year:

2013

Language:

english

File:

PDF, 1.33 MB

english, 2013

21

Trapping and visualizing intermediate steps in the mismatch repair pathway in vivo

Lenhart, Justin S., Pillon, Monica C., Guarné, Alba, Simmons, Lyle A.

Journal:

Molecular Microbiology

Year:

2013

Language:

english

File:

PDF, 3.67 MB

english, 2013

22

In Vivo Visualization of Mismatch Repair in Bacillus Subtilis using Single-Molecule Fluorescence Microscopy

Liao, Yi, Schroeder, Jeremy, Simmons, Lyle, Biteen, Julie

Journal:

Biophysical Journal

Year:

2013

Language:

english

File:

PDF, 39 KB

english, 2013

23

Single-Molecule Fluorescence Imaging of Reco Localization and Dynamics in Bacillus Subtilis

Tuson, Hannah H., Liao, Yi, Simmons, Lyle A., Biteen, Julie S.

Journal:

Biophysical Journal

Year:

2014

Language:

english

File:

PDF, 43 KB

english, 2014

24

Single-Molecule Fluorescence Imaging Reveals Mismatch Repair Dynamics in Live Bacillus Subtilis

Liao, Yi, Schroeder, Jeremy W., Simmons, Lyle A., Biteen, Julie S.

Journal:

Biophysical Journal

Year:

2014

Language:

english

File:

PDF, 92 KB

english, 2014

25

A four-step approach to evaluate mixtures for consistency with dose addition

Hertzberg, Richard C., Pan, Yi, Li, Ruosha, Haber, Lynne T., Lyles, Robert H., Herr, David W., Moser, Virginia C., Simmons, Jane Ellen

Journal:

Year:

2013

Language:

english

File:

PDF, 1.11 MB

english, 2013

26

Drinking Game Participation Among Undergraduate Students Attending National Alcohol Screening Day

Cameron, Jennifer M., Heidelberg, Natalie, Simmons, Lisa, Lyle, Sarah B., Mitra-Varma, Kathakali, Correia, Chris

Journal:

Journal of American College Health

Year:

2010

Language:

english

File:

PDF, 118 KB

english, 2010

27

Ribonucleotides in bacterial DNA

Schroeder, Jeremy W., Randall, Justin R., Matthews, Lindsay A., Simmons, Lyle A.

Journal:

Critical Reviews in Biochemistry and Molecular Biology

Year:

2015

Language:

english

File:

PDF, 611 KB

english, 2015

28

The SOS Regulatory Network

Cohen, Susan E., Foti, James J., Simmons, Lyle A., Walker, Graham C.

Journal:

Year:

2013

Language:

english

File:

PDF, 470 KB

english, 2013

29

Involvement of Mismatch Repair in the Reciprocal Control of Motility and Adherence of Uropathogenic Escherichia coli

Cooper, Lauren A., Simmons, Lyle A., Mobley, Harry L. T., Payne, S. M.

Journal:

Infection and Immunity

Year:

2012

Language:

english

File:

PDF, 991 KB

english, 2012

30

Attitudes toward and beliefs about the use of a dental diagnostic terminology

Ramoni, Rachel B., Walji, Muhammad F., Kim, Soyun, Tokede, Oluwabunmi, McClellan, Lyle, Simmons, Kristen, Skourtes, Eugene, Yansane, Alfa, White, Joel M., Kalenderian, Elsbeth

Journal:

Journal of the American Dental Association

Year:

2015

Language:

english

File:

PDF, 306 KB

english, 2015

31

DNA Damage and Reactive Nitrogen Species are Barriers to Vibrio cholerae Colonization of the Infant Mouse Intestine

Davies, Bryan W., Bogard, Ryan W., Dupes, Nicole M., Gerstenfeld, Tyler A. I., Simmons, Lyle A., Mekalanos, John J., Roy, Craig R.

Journal:

Year:

2011

Language:

english

File:

PDF, 776 KB

english, 2011

32

Mismatch repair in Gram-positive bacteria

Lenhart, Justin S., Pillon, Monica C., Guarné, Alba, Biteen, Julie S., Simmons, Lyle A.

Journal:

Research in Microbiology

Year:

2015

Language:

english

File:

PDF, 1.13 MB

english, 2015

33

Single-molecule motions and interactions in live cells reveal target search dynamics in mismatch repair

Liao, Yi, Schroeder, Jeremy W., Gao, Burke, Simmons, Lyle A., Biteen, Julie S.

Journal:

Proceedings of the National Academy of Sciences

Year:

2015

Language:

english

File:

PDF, 1.93 MB

english, 2015

34

The Effect of Local Sequence Context on Mutational Bias of Genes Encoded on the Leading and Lagging Strands

Schroeder, Jeremy W., Hirst, William G., Szewczyk, Gabriella A., Simmons, Lyle A.

Journal:

Current Biology

Year:

2016

Language:

english

File:

PDF, 1.02 MB

english, 2016

35

The sliding clamp tethers the endonuclease domain of MutL to DNA

Pillon, Monica C., Babu, Vignesh M. P., Randall, Justin R., Cai, Jiudou, Simmons, Lyle A., Sutton, Mark D., Guarné, Alba

Journal:

Nucleic Acids Research

Year:

2015

Language:

english

File:

PDF, 5.00 MB

english, 2015

36

Corrigendum to A four-step approach to evaluate mixtures for consistency with dose addition [Toxicology 313 (November 2013) 134–144]

Hertzberg, Richard C., Pan, Yi, Li, Ruosha, Haber, Lynne T., Lyles, Robert H., Herr, David W., Moser, Virginia C., Simmons, Jane Ellen

Journal:

Year:

2015

Language:

english

File:

PDF, 167 KB

english, 2015

37

Super-Resolution Imaging of DNA Replisome Dynamics in Live Bacillus Subtilis

Li, Yilai, Schroeder, Jeremy W., Liao, Yi, Simmons, Lyle A., Biteen, Julie S.

Journal:

Biophysical Journal

Year:

2016

Language:

english

File:

PDF, 59 KB

english, 2016

38

Addressing the Requirements of High-Sensitivity Single-Molecule Imaging of Low-Copy-Number Proteins in Bacteria

Tuson, Hannah H., Aliaj, Alisa, Brandes, Eileen R., Simmons, Lyle A., Biteen, Julie S.

Journal:

Year:

2016

Language:

english

File:

PDF, 1.13 MB

english, 2016

39

Book Reviews

Frohman, I. Phillips, Johnson, Einer W., Wellman, William E., Weed, Lyle A., Banner, Edward A., Litin, Edward M., Spittell, John A., Callahan, John A., O'Phelan, E. Harvey, Simmons, Robert L., Banner,

Journal:

Postgraduate Medicine

Year:

1965

Language:

english

File:

PDF, 731 KB

english, 1965

40

Implementation and data analysis of Tn-seq, whole genome resequencing, and single-molecule real time sequencing for bacterial genetics

Burby, Peter E., Nye, Taylor M., Schroeder, Jeremy W., Simmons, Lyle A.

Journal:

Journal of Bacteriology

Year:

2016

Language:

english

File:

PDF, 1.75 MB

english, 2016

41

MutS2 promotes homologous recombination in Bacillus subtilis

Burby, Peter E., Simmons, Lyle A.

Journal:

Journal of Bacteriology

Year:

2016

Language:

english

File:

PDF, 2.08 MB

english, 2016

42

Single-Molecule DNA Polymerase Dynamics at a Bacterial Replisome in Live Cells

Liao, Yi, Li, Yilai, Schroeder, Jeremy W., Simmons, Lyle A., Biteen, Julie S.

Journal:

Biophysical Journal

Year:

2016

Language:

english

File:

PDF, 1.10 MB

english, 2016

43

Super-Resolution Imaging of DNA Replisome Dynamics in Live Bacillus Subtilis

Li, Yilai, Schroeder, Jeremy W., Liao, Yi, Simmons, Lyle A., Biteen, Julie S.

Journal:

Biophysical Journal

Year:

2017

Language:

english

File:

PDF, 44 KB

english, 2017

44

Adoption of dental innovations

Ramoni, Rachel B., Etolue, Jini, Tokede, Oluwabunmi, McClellan, Lyle, Simmons, Kristen, Yansane, Alfa, White, Joel M., Walji, Muhammad F., Kalenderian, Elsbeth

Journal:

Journal of the American Dental Association

Year:

2017

Language:

english

File:

PDF, 443 KB

english, 2017

45

Complete Genome Sequence of Undomesticated Bacillus subtilis Strain NCIB 3610

Nye, Taylor M., Schroeder, Jeremy W., Kearns, Daniel B., Simmons, Lyle A.

Journal:

Genome Announcements

Year:

2017

Language:

english

File:

PDF, 120 KB

english, 2017

46

Mutagenic cost of ribonucleotides in bacterial DNA

Schroeder, Jeremy W., Randall, Justin R., Hirst, William G., O’Donnell, Michael E., Simmons, Lyle A.

Journal:

Proceedings of the National Academy of Sciences

Year:

2017

Language:

english

File:

PDF, 989 KB

english, 2017

47

Substrate specificity for bacterial RNase HII and HIII is influenced by metal availability

Randall, Justin R., Hirst, William G., Simmons, Lyle A.

Journal:

Journal of Bacteriology

Year:

2017

Language:

english

File:

PDF, 2.84 MB

english, 2017

48

Visualizing bacterial DNA replication and repair with molecular resolution

Li, Yilai, Schroeder, Jeremy W, Simmons, Lyle A, Biteen, Julie S

Journal:

Current Opinion in Microbiology

Year:

2018

Language:

english

File:

PDF, 1.37 MB

english, 2018

49

Protein Interactions in Genome Maintenance as Novel Antibacterial Targets

Marceau, Aimee H., Bernstein, Douglas A., Walsh, Brian W., Shapiro, Walker, Simmons, Lyle A., Keck, James L., Korolev, Sergey

Journal:

Year:

2013

Language:

english

File:

PDF, 3.16 MB

english, 2013

50

Discovery of a dual protease mechanism that promotes DNA damage checkpoint recovery

Burby, Peter E., Simmons, Zackary W., Schroeder, Jeremy W., Simmons, Lyle A., Matic, Ivan

Journal:

Year:

2018

Language:

english

File:

PDF, 24.45 MB

english, 2018